qmk_firmware/keyboard/clueboard2/clueboard2.c

#include "clueboard2.h"

#ifdef BACKLIGHT_ENABLE
#include "backlight.h"
#endif

__attribute__ ((weak))
void matrix_init_user(void) {
	// leave these blank
};

__attribute__ ((weak))
void matrix_scan_user(void) {
	// leave these blank
};

void matrix_init_kb(void) {
	// put your keyboard start-up code here
	// runs once when the firmware starts up
	if (matrix_init_user) {
		(*matrix_init_user)();
	}
	led_init_ports();

    #ifdef BACKLIGHT_ENABLE
        init_backlight_pin();
    #endif

    // JTAG disable for PORT F. write JTD bit twice within four cycles.
    MCUCR |= (1<<JTD);
    MCUCR |= (1<<JTD);
};

void matrix_scan_kb(void) {
	// put your looping keyboard code here
	// runs every cycle (a lot)
	if (matrix_scan_user) {
		(*matrix_scan_user)();
	}
};